refactor(repo): reorganize repository structure for improved navigation and maintainability

Implement comprehensive directory reorganization to improve discoverability,
logical grouping, and separation of concerns across documentation, scripts,
and infrastructure snapshots.

Major Changes:

1. Documentation Reorganization:
   - Created start-here-docs/ for onboarding documentation
     * Moved QUICK-START.md, START-HERE.md, GIT-SETUP-GUIDE.md
     * Moved GIT-QUICK-REFERENCE.md, SCRIPT-USAGE.md, SETUP-COMPLETE.md
   - Created troubleshooting/ directory
     * Moved BUGFIX-SUMMARY.md for centralized issue resolution
   - Created mcp/ directory for Model Context Protocol configurations
     * Moved OBSIDIAN-MCP-SETUP.md to mcp/obsidian/

2. Scripts Reorganization:
   - Created scripts/crawlers-exporters/ for infrastructure collection
     * Moved collect*.sh scripts and collection documentation
     * Consolidates Proxmox homelab export tooling
   - Created scripts/fixers/ for operational repair scripts
     * Moved fix_n8n_db_*.sh scripts
     * Isolated scripts with embedded credentials (templates tracked)
   - Created scripts/qol/ for quality-of-life utilities
     * Moved git-aliases.sh and git-first-commit.sh

3. Infrastructure Snapshots:
   - Created disaster-recovery/ for active infrastructure state
     * Moved latest homelab-export-20251202-204939/ snapshot
     * Contains current VM/CT configurations and system state
   - Created archive-homelab/ for historical snapshots
     * Moved homelab-export-*.tar.gz archives
     * Preserves point-in-time backups for reference

4. Agent Definitions:
   - Created sub-agents/ directory
     * Added backend-builder.md (development agent)
     * Added lab-operator.md (infrastructure operations agent)
     * Added librarian.md (git/version control agent)
     * Added scribe.md (documentation agent)

5. Updated INDEX.md:
   - Reflects new directory structure throughout
   - Updated all file path references
   - Enhanced navigation with new sections
   - Added agent roles documentation
   - Updated quick reference commands

6. Security Improvements:
   - Updated .gitignore to match reorganized file locations
   - Corrected path for scripts/fixers/fix_n8n_db_c_locale.sh exclusion
   - Maintained template-based credential management pattern

Infrastructure State Update:
   - Latest snapshot: 2025-12-02 20:49:54
   - Removed: VM 101 (gitlab), CT 112 (Anytype)
   - Added: CT 113 (n8n)
   - Total: 9 VMs, 3 Containers

Impact:
   - Improved repository navigation and discoverability
   - Logical separation of documentation, scripts, and snapshots
   - Clearer onboarding path for new users
   - Enhanced maintainability through organized structure
   - Foundation for multi-agent workflow support

Files changed: 90 files (+935/-349)
   - 3 modified, 14 new files, 73 renames/moves

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>

scripts/qol/git-first-commit.sh

@@ -0,0 +1,139 @@
+#!/bin/bash
+# First-time Git Setup and Initial Commit Helper
+# This script helps you make your first commit to the homelab repository
+
+set -e
+
+# Colors for pretty output
+GREEN='\033[0;32m'
+BLUE='\033[0;34m'
+YELLOW='\033[1;33m'
+RED='\033[0;31m'
+NC='\033[0m' # No Color
+
+echo -e "${BLUE}================================================${NC}"
+echo -e "${BLUE}  Homelab Git - Initial Commit Setup${NC}"
+echo -e "${BLUE}================================================${NC}"
+echo
+
+# Check if we're in the right directory
+if [ ! -d ".git" ]; then
+    echo -e "${RED}Error: Not in a git repository!${NC}"
+    echo "Please run this script from /home/jramos/homelab"
+    exit 1
+fi
+
+# Check if git user is configured
+USER_NAME=$(git config --global user.name 2>/dev/null || echo "")
+USER_EMAIL=$(git config --global user.email 2>/dev/null || echo "")
+
+if [ -z "$USER_NAME" ] || [ -z "$USER_EMAIL" ]; then
+    echo -e "${YELLOW}Git user not configured. Let's set that up first.${NC}"
+    echo
+
+    # Get user name
+    if [ -z "$USER_NAME" ]; then
+        echo -e "${BLUE}Enter your name (e.g., 'John Smith'):${NC}"
+        read -p "> " USER_NAME
+        git config --global user.name "$USER_NAME"
+        echo -e "${GREEN}Name set to: $USER_NAME${NC}"
+    fi
+
+    # Get user email
+    if [ -z "$USER_EMAIL" ]; then
+        echo
+        echo -e "${BLUE}Enter your email (e.g., 'john@example.com'):${NC}"
+        read -p "> " USER_EMAIL
+        git config --global user.email "$USER_EMAIL"
+        echo -e "${GREEN}Email set to: $USER_EMAIL${NC}"
+    fi
+
+    echo
+fi
+
+echo -e "${GREEN}Git user configured:${NC}"
+echo "  Name:  $(git config --global user.name)"
+echo "  Email: $(git config --global user.email)"
+echo
+
+# Show current status
+echo -e "${YELLOW}Current repository status:${NC}"
+git status
+echo
+
+# Ask about .env file
+echo -e "${YELLOW}About the .env file:${NC}"
+echo "The .gitignore file is configured to IGNORE your .env file"
+echo "(it contains sensitive information and should not be committed)"
+echo
+echo "Only .env.example will be tracked in git."
+echo
+
+# Ask if ready to commit
+echo -e "${BLUE}Ready to create your first commit?${NC}"
+echo "This will add all files (except those in .gitignore) to version control."
+echo
+read -p "Continue? (y/n): " -n 1 -r
+echo
+if [[ ! $REPLY =~ ^[Yy]$ ]]; then
+    echo -e "${YELLOW}Commit cancelled. No changes made.${NC}"
+    exit 0
+fi
+
+# Add all files
+echo
+echo -e "${YELLOW}Step 1: Adding files to staging area...${NC}"
+git add .
+
+# Show what will be committed
+echo
+echo -e "${YELLOW}Step 2: Files to be committed:${NC}"
+git status
+
+# Create the commit
+echo
+echo -e "${YELLOW}Step 3: Creating initial commit...${NC}"
+git commit -m "Initial commit: Homelab infrastructure repository
+
+This commit includes:
+- Proxmox configuration collection scripts
+- Environment configuration templates
+- Comprehensive documentation
+- Git ignore patterns for sensitive data
+
+Infrastructure: Proxmox VE 8.3.3
+Node: serviceslab
+VMs: 11 virtual machines (docker-hub, gitlab, dev, ansible, CML, web servers, db)
+Containers: 3 LXC containers (nginx, netbox, anytype)
+"
+
+echo
+echo -e "${GREEN}================================================${NC}"
+echo -e "${GREEN}  Success! Your homelab is now under version control${NC}"
+echo -e "${GREEN}================================================${NC}"
+echo
+echo "What you can do now:"
+echo
+echo -e "${BLUE}View commit history:${NC}"
+echo "  git log"
+echo
+echo -e "${BLUE}View changes since last commit:${NC}"
+echo "  git status"
+echo "  git diff"
+echo
+echo -e "${BLUE}Make changes and commit them:${NC}"
+echo "  # Make your changes to files"
+echo "  git add <file>              # Stage specific file"
+echo "  git add .                   # Stage all changes"
+echo "  git commit -m \"Description\"  # Commit with message"
+echo
+echo -e "${BLUE}View file history:${NC}"
+echo "  git log --oneline"
+echo "  git log --graph --oneline --all"
+echo
+echo -e "${YELLOW}Repository location:${NC}"
+echo "  Linux: /home/jramos/homelab"
+echo "  Windows: \\\\wsl\$\\Ubuntu\\home\\jramos\\homelab"
+echo
+echo -e "${GREEN}Happy homelabbing!${NC}"
+echo