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refactor(repo): reorganize repository structure for improved navigation and maintainability

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Implement comprehensive directory reorganization to improve discoverability,
logical grouping, and separation of concerns across documentation, scripts,
and infrastructure snapshots.

Major Changes:

1. Documentation Reorganization:
   - Created start-here-docs/ for onboarding documentation
     * Moved QUICK-START.md, START-HERE.md, GIT-SETUP-GUIDE.md
     * Moved GIT-QUICK-REFERENCE.md, SCRIPT-USAGE.md, SETUP-COMPLETE.md
   - Created troubleshooting/ directory
     * Moved BUGFIX-SUMMARY.md for centralized issue resolution
   - Created mcp/ directory for Model Context Protocol configurations
     * Moved OBSIDIAN-MCP-SETUP.md to mcp/obsidian/

2. Scripts Reorganization:
   - Created scripts/crawlers-exporters/ for infrastructure collection
     * Moved collect*.sh scripts and collection documentation
     * Consolidates Proxmox homelab export tooling
   - Created scripts/fixers/ for operational repair scripts
     * Moved fix_n8n_db_*.sh scripts
     * Isolated scripts with embedded credentials (templates tracked)
   - Created scripts/qol/ for quality-of-life utilities
     * Moved git-aliases.sh and git-first-commit.sh

3. Infrastructure Snapshots:
   - Created disaster-recovery/ for active infrastructure state
     * Moved latest homelab-export-20251202-204939/ snapshot
     * Contains current VM/CT configurations and system state
   - Created archive-homelab/ for historical snapshots
     * Moved homelab-export-*.tar.gz archives
     * Preserves point-in-time backups for reference

4. Agent Definitions:
   - Created sub-agents/ directory
     * Added backend-builder.md (development agent)
     * Added lab-operator.md (infrastructure operations agent)
     * Added librarian.md (git/version control agent)
     * Added scribe.md (documentation agent)

5. Updated INDEX.md:
   - Reflects new directory structure throughout
   - Updated all file path references
   - Enhanced navigation with new sections
   - Added agent roles documentation
   - Updated quick reference commands

6. Security Improvements:
   - Updated .gitignore to match reorganized file locations
   - Corrected path for scripts/fixers/fix_n8n_db_c_locale.sh exclusion
   - Maintained template-based credential management pattern

Infrastructure State Update:
   - Latest snapshot: 2025-12-02 20:49:54
   - Removed: VM 101 (gitlab), CT 112 (Anytype)
   - Added: CT 113 (n8n)
   - Total: 9 VMs, 3 Containers

Impact:
   - Improved repository navigation and discoverability
   - Logical separation of documentation, scripts, and snapshots
   - Clearer onboarding path for new users
   - Enhanced maintainability through organized structure
   - Foundation for multi-agent workflow support

Files changed: 90 files (+935/-349)
   - 3 modified, 14 new files, 73 renames/moves

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
This commit is contained in:
Jordan Ramos
2025-12-02 21:39:33 -07:00
parent eec4c4b298
commit 4f69420aaa
90 changed files with 935 additions and 349 deletions
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start-here-docs/SETUP-COMPLETE.md Normal file
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# Git Setup Complete - Summary
**Date**: November 29, 2025
**Status**: ✅ Repository successfully initialized
**Location**: `/home/jramos/homelab`
---
## What Was Done
### 1. Problem Identified
Your attempt to use git in the Windows filesystem (`/mnt/c/Users/fam1n/Documents/homelab`) failed because:
- Windows NTFS doesn't support POSIX file permissions
- Git requires proper permissions for lock files
- WSL2 translation layer can't bridge this gap for git operations
**Error encountered**: `chmod on .git/config.lock failed: Operation not permitted`
### 2. Solution Implemented
We moved your repository to the **Linux filesystem** where git works properly:
- **Created**: `/home/jramos/homelab` (Linux filesystem)
- **Copied**: All files from Windows location to Linux location
- **Initialized**: Git repository with proper configuration
- **Configured**: `.gitignore` to protect sensitive files
### 3. Files Created
| File | Purpose |
|------|---------|
| `.gitignore` | Prevents sensitive files from being tracked |
| `README.md` | Main repository documentation |
| `GIT-SETUP-GUIDE.md` | Complete guide explaining what we did and why |
| `GIT-QUICK-REFERENCE.md` | Quick command reference for daily use |
| `git-first-commit.sh` | Interactive script to make your first commit |
| `SETUP-COMPLETE.md` | This file |
---
## Repository Status
```
Location: /home/jramos/homelab
Git initialized: Yes ✅
Branch: main
Commits: 0 (no commits yet)
Untracked files: 73
Ignored files: 2 (.env, .claude/settings.local.json)
```
### Protected Files (Ignored by Git)
- `.env` - Your environment configuration with sensitive data
- `.claude/settings.local.json` - Local settings
- All patterns in `.gitignore` (ISOs, disk images, archives, logs, etc.)
### Ready to Track
- All scripts (`.sh` files)
- Documentation (`.md` files)
- `.env.example` (template, safe to share)
- Configuration files
- Collection exports (optional)
---
## How to Access Your Repository
### From WSL2 Terminal
```bash
cd /home/jramos/homelab
```
### From Windows File Explorer
1. Open File Explorer
2. In address bar, type: `\\wsl$\Ubuntu\home\jramos\homelab`
3. Press Enter
4. **Optional**: Right-click folder → "Pin to Quick access" for easy access
### From Windows Command Prompt / PowerShell
```powershell
\\wsl$\Ubuntu\home\jramos\homelab
```
---
## Your Next Steps
### Step 1: Make Your First Commit
**Option A - Use the Helper Script (Recommended for Beginners)**
```bash
cd /home/jramos/homelab
./git-first-commit.sh
```
This interactive script will:
- Set up your git identity (name and email) if needed
- Show you what will be committed
- Create your first commit
- Explain what to do next
**Option B - Manual Method**
```bash
cd /home/jramos/homelab
# Set your identity (one-time setup)
git config --global user.name "Your Name"
git config --global user.email "your.email@example.com"
# Review what will be committed
git status
git diff
# Stage all files
git add .
# Create the commit
git commit -m "Initial commit: Homelab infrastructure repository"
# View your commit
git log
```
### Step 2: Start Using Git Daily
Every time you make changes to your homelab:
```bash
cd /home/jramos/homelab
# After editing files...
git status # See what changed
git diff # See details of changes
git add . # Stage all changes
git commit -m "Description of what you changed"
git log --oneline -5 # View recent commits
```
### Step 3: Learn the Basics
**Essential Reading** (in order):
1. `GIT-QUICK-REFERENCE.md` - Daily commands you'll use
2. `GIT-SETUP-GUIDE.md` - Complete explanation of setup and workflows
3. `README.md` - Repository overview
**Quick Command Reference**:
```bash
git status # What changed?
git diff # Show me the changes
git add . # Stage everything
git commit -m "msg" # Save changes
git log --oneline # Show history
```
---
## What About the Windows Directory?
You have two options:
### Option 1: Keep Both (Recommended)
- **Windows**: `/mnt/c/Users/fam1n/Documents/homelab` - Use for daily work in Windows
- **Linux**: `/home/jramos/homelab` - Git repository for version control
When you make changes in Windows, sync to Linux:
```bash
rsync -av --exclude='.git' /mnt/c/Users/fam1n/Documents/homelab/ /home/jramos/homelab/
cd /home/jramos/homelab
git add .
git commit -m "Updated from Windows"
```
### Option 2: Use Only Linux Directory
- Work exclusively in `/home/jramos/homelab`
- Access via `\\wsl$\Ubuntu\home\jramos\homelab` from Windows
- Archive or delete the old Windows directory
**Recommendation**: Try Option 2 (Linux only) for a week. It's simpler and git will always work.
---
## Common Questions
### Q: Can I still access files from Windows?
**A**: Yes! Use `\\wsl$\Ubuntu\home\jramos\homelab` in File Explorer.
### Q: What if I accidentally edit files in the old Windows location?
**A**: Just copy them to the Linux location using the rsync command above.
### Q: Will my .env file be committed?
**A**: No, it's in `.gitignore` and will be ignored by git. Only `.env.example` is tracked.
### Q: Can I edit files in VS Code or other Windows editors?
**A**: Yes! Open the `\\wsl$\Ubuntu\home\jramos\homelab` directory in any Windows application.
### Q: What if I make a mistake in git?
**A**: Git is very forgiving. See "Emergency Commands" in `GIT-QUICK-REFERENCE.md`.
### Q: Do I need GitHub/GitLab?
**A**: Not for now. This is a local git repository. You can add remote backup later if you want.
---
## Verification Checklist
Before making your first commit, verify:
- [ ] You can navigate to `/home/jramos/homelab` in WSL2
- [ ] `git status` works without errors
- [ ] `.env` is shown as "Ignored" (run `git status --ignored`)
- [ ] `.env.example` is shown as "Untracked" (will be committed)
- [ ] You can access the directory from Windows Explorer
All checks should pass. If not, see `GIT-SETUP-GUIDE.md` troubleshooting section.
---
## Emergency Contacts
| Issue | Solution |
|-------|----------|
| "chmod failed" error | You're in `/mnt/c/...` instead of `/home/...` |
| "not a git repository" | Run `cd /home/jramos/homelab` |
| "Please tell me who you are" | Set git identity with `git config --global user.name` and `user.email` |
| Committed wrong thing | `git reset --soft HEAD~1` (undo last commit, keep changes) |
| Accidentally changed file | `git checkout -- filename` (restore from last commit) |
---
## Summary
**What you have now**:
- ✅ Working git repository in Linux filesystem
- ✅ All files copied and safe
- ✅ Sensitive files protected by `.gitignore`
- ✅ Accessible from both WSL2 and Windows
- ✅ Ready for your first commit
**What to do next**:
1. Run `./git-first-commit.sh` to make your first commit
2. Start tracking changes to your homelab infrastructure
3. Learn git basics using the reference guides
**Why this matters**:
- 📚 Track history of all infrastructure changes
- ⏪ Undo mistakes easily
- 📝 Document why changes were made
- 🔒 Backup your configuration work
- 🧪 Experiment without fear
---
**Congratulations!** Your homelab is now under professional version control. Start committing changes and build up a history of your infrastructure evolution.
For questions or issues, refer to:
- `GIT-SETUP-GUIDE.md` - Detailed explanations
- `GIT-QUICK-REFERENCE.md` - Quick command lookup
- Git documentation: https://git-scm.com/doc
Happy homelabbing!
---
*Setup completed: 2025-11-29*
*Git version: 2.43.0*
*WSL Distribution: Ubuntu*